Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.39□□□□□ -0.11
Lsm3P62311 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.39□□□□□ -0.11
Lsm3P62311 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Lsm3P62311 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm3P62311 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Lsm3P62311 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lsm3P62311 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm3P62311 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lsm3P62311 Actl10-202ENSMUST00000226583 1501 ntBASIC14.38□□□□□ -0.11
Lsm3P62311 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Lsm3P62311 Gm13148-201ENSMUST00000118892 745 ntBASIC14.38□□□□□ -0.11
Lsm3P62311 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Gm2559-201ENSMUST00000201323 363 ntBASIC14.38□□□□□ -0.11
Lsm3P62311 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Lsm3P62311 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.38□□□□□ -0.11
Lsm3P62311 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm3P62311 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm3P62311 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lsm3P62311 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm3P62311 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm3P62311 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.38□□□□□ -0.11
Lsm3P62311 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm3P62311 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm3P62311 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Lsm3P62311 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Efs-202ENSMUST00000227037 2540 ntBASIC14.37□□□□□ -0.11
Lsm3P62311 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm3P62311 Gm37292-201ENSMUST00000192062 758 ntBASIC14.37□□□□□ -0.11
Lsm3P62311 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Lsm3P62311 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.37□□□□□ -0.11
Lsm3P62311 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.37□□□□□ -0.11
Lsm3P62311 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm3P62311 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Lsm3P62311 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms