Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.31□□□□□ -0.12
Vbp1P61759 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Vbp1P61759 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Vbp1P61759 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vbp1P61759 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vbp1P61759 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Vbp1P61759 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vbp1P61759 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.3□□□□□ -0.12
Vbp1P61759 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vbp1P61759 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Vbp1P61759 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vbp1P61759 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.29□□□□□ -0.12
Vbp1P61759 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Vbp1P61759 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.29□□□□□ -0.12
Vbp1P61759 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Vbp1P61759 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vbp1P61759 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Gm42642-201ENSMUST00000200683 355 ntBASIC14.29□□□□□ -0.12
Vbp1P61759 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vbp1P61759 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.29□□□□□ -0.12
Vbp1P61759 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Vbp1P61759 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.29□□□□□ -0.12
Vbp1P61759 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Vbp1P61759 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vbp1P61759 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Vbp1P61759 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vbp1P61759 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.28□□□□□ -0.12
Vbp1P61759 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.28□□□□□ -0.12
Vbp1P61759 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.28□□□□□ -0.12
Vbp1P61759 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.28□□□□□ -0.12
Vbp1P61759 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vbp1P61759 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms