Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm21814-202ENSMUST00000203277 873 ntBASIC17.56■□□□□ 0.4
Tpm1P58771 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tpm1P58771 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.56■□□□□ 0.4
Tpm1P58771 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Tpm1P58771 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
Tpm1P58771 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.55■□□□□ 0.4
Tpm1P58771 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.55■□□□□ 0.4
Tpm1P58771 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.55■□□□□ 0.4
Tpm1P58771 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.55■□□□□ 0.4
Tpm1P58771 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Tpm1P58771 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm1P58771 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm1P58771 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm1P58771 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.54■□□□□ 0.4
Tpm1P58771 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tpm1P58771 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Tpm1P58771 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm1P58771 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.54■□□□□ 0.4
Tpm1P58771 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm1P58771 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tpm1P58771 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Tpm1P58771 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Tpm1P58771 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.53■□□□□ 0.4
Tpm1P58771 Gm7370-201ENSMUST00000219471 767 ntBASIC17.53■□□□□ 0.4
Tpm1P58771 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tpm1P58771 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm1P58771 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.52■□□□□ 0.4
Tpm1P58771 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tpm1P58771 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms