Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdh5P55284 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh5P55284 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.33■□□□□ 0.05
Cdh5P55284 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cdh5P55284 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh5P55284 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Cdh5P55284 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cdh5P55284 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh5P55284 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdh5P55284 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdh5P55284 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdh5P55284 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdh5P55284 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Gm17807-201ENSMUST00000186869 298 ntBASIC15.32■□□□□ 0.04
Cdh5P55284 Gm18115-201ENSMUST00000221209 621 ntBASIC15.32■□□□□ 0.04
Cdh5P55284 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.32■□□□□ 0.04
Cdh5P55284 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh5P55284 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.31■□□□□ 0.04
Cdh5P55284 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdh5P55284 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.31■□□□□ 0.04
Cdh5P55284 Gm45328-201ENSMUST00000210942 917 ntBASIC15.31■□□□□ 0.04
Cdh5P55284 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdh5P55284 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdh5P55284 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdh5P55284 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdh5P55284 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh5P55284 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh5P55284 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdh5P55284 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh5P55284 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdh5P55284 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdh5P55284 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms