Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Abcd3P55096 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.05□□□□□ -0.16
Abcd3P55096 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Abcd3P55096 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Abcd3P55096 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Abcd3P55096 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Abcd3P55096 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Gm9172-201ENSMUST00000212092 954 ntBASIC14.05□□□□□ -0.16
Abcd3P55096 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Abcd3P55096 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abcd3P55096 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.04□□□□□ -0.16
Abcd3P55096 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Abcd3P55096 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.04□□□□□ -0.16
Abcd3P55096 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Abcd3P55096 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Abcd3P55096 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.04□□□□□ -0.16
Abcd3P55096 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Gm15165-201ENSMUST00000118140 502 ntBASIC14.04□□□□□ -0.16
Abcd3P55096 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Gm27357-201ENSMUST00000183754 135 ntBASIC14.04□□□□□ -0.16
Abcd3P55096 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.04□□□□□ -0.16
Abcd3P55096 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.04□□□□□ -0.16
Abcd3P55096 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.04□□□□□ -0.16
Abcd3P55096 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Abcd3P55096 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.04□□□□□ -0.16
Abcd3P55096 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Abcd3P55096 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abcd3P55096 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.03□□□□□ -0.16
Abcd3P55096 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.03□□□□□ -0.16
Abcd3P55096 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Abcd3P55096 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.03□□□□□ -0.16
Abcd3P55096 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.03□□□□□ -0.16
Abcd3P55096 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.03□□□□□ -0.16
Abcd3P55096 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.03□□□□□ -0.16
Abcd3P55096 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Gm10819-201ENSMUST00000099988 561 ntBASIC14.03□□□□□ -0.16
Abcd3P55096 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.03□□□□□ -0.16
Abcd3P55096 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.03□□□□□ -0.16
Abcd3P55096 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd3P55096 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Abcd3P55096 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms