Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msh6P54276 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.83■□□□□ 0.76
Msh6P54276 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msh6P54276 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.83■□□□□ 0.76
Msh6P54276 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.83■□□□□ 0.76
Msh6P54276 Gm44335-201ENSMUST00000196879 141 ntBASIC19.83■□□□□ 0.76
Msh6P54276 Gm44297-201ENSMUST00000198304 141 ntBASIC19.83■□□□□ 0.76
Msh6P54276 Gm44346-201ENSMUST00000198851 141 ntBASIC19.83■□□□□ 0.76
Msh6P54276 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.83■□□□□ 0.76
Msh6P54276 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.83■□□□□ 0.76
Msh6P54276 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Msh6P54276 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Msh6P54276 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.82■□□□□ 0.76
Msh6P54276 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.82■□□□□ 0.76
Msh6P54276 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Msh6P54276 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Msh6P54276 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.82■□□□□ 0.76
Msh6P54276 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Msh6P54276 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.82■□□□□ 0.76
Msh6P54276 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.82■□□□□ 0.76
Msh6P54276 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.82■□□□□ 0.76
Msh6P54276 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh6P54276 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Msh6P54276 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Msh6P54276 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.81■□□□□ 0.76
Msh6P54276 Gm27301-201ENSMUST00000184012 127 ntBASIC19.81■□□□□ 0.76
Msh6P54276 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh6P54276 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.81■□□□□ 0.76
Msh6P54276 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.8■□□□□ 0.76
Msh6P54276 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.8■□□□□ 0.76
Msh6P54276 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.8■□□□□ 0.76
Msh6P54276 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.8■□□□□ 0.76
Msh6P54276 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh6P54276 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Msh6P54276 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Msh6P54276 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Gm11745-201ENSMUST00000121669 448 ntBASIC19.79■□□□□ 0.76
Msh6P54276 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Msh6P54276 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Msh6P54276 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh6P54276 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.79■□□□□ 0.76
Msh6P54276 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Msh6P54276 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Msh6P54276 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh6P54276 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms