Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44357-201ENSMUST00000195897 142 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm19658-201ENSMUST00000196231 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44367-201ENSMUST00000196836 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44350-201ENSMUST00000197197 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44390-201ENSMUST00000197533 144 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44313-201ENSMUST00000198018 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44486-201ENSMUST00000198508 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44314-201ENSMUST00000199263 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44394-201ENSMUST00000199558 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44484-201ENSMUST00000199873 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44466-201ENSMUST00000200264 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Gm44359-201ENSMUST00000200671 138 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.54■□□□□ 0.08
Pdx1P52946 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.54■□□□□ 0.08
Pdx1P52946 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.54■□□□□ 0.08
Pdx1P52946 Gm18622-201ENSMUST00000219361 595 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.54■□□□□ 0.08
Pdx1P52946 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pdx1P52946 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pdx1P52946 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.53■□□□□ 0.08
Pdx1P52946 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.53■□□□□ 0.08
Pdx1P52946 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdx1P52946 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.53■□□□□ 0.08
Pdx1P52946 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdx1P52946 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.52■□□□□ 0.08
Pdx1P52946 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdx1P52946 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdx1P52946 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdx1P52946 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pdx1P52946 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Pdx1P52946 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pdx1P52946 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pdx1P52946 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.52■□□□□ 0.08
Pdx1P52946 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.52■□□□□ 0.08
Pdx1P52946 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.52■□□□□ 0.07
Pdx1P52946 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pdx1P52946 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdx1P52946 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pdx1P52946 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.51■□□□□ 0.07
Pdx1P52946 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pdx1P52946 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Gm7153-201ENSMUST00000117092 455 ntBASIC15.51■□□□□ 0.07
Pdx1P52946 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Gm8655-201ENSMUST00000221159 852 ntBASIC15.51■□□□□ 0.07
Pdx1P52946 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Grk6-207ENSMUST00000225925 2769 ntBASIC15.51■□□□□ 0.07
Pdx1P52946 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pdx1P52946 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdx1P52946 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdx1P52946 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms