Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ercc3P49135 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.64■□□□□ 0.57
Ercc3P49135 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ercc3P49135 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Prob1-201ENSMUST00000097619 3021 ntBASIC18.63■□□□□ 0.57
Ercc3P49135 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Ercc3P49135 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.63■□□□□ 0.57
Ercc3P49135 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ercc3P49135 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Mir8098-201ENSMUST00000184011 137 ntBASIC18.63■□□□□ 0.57
Ercc3P49135 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.63■□□□□ 0.57
Ercc3P49135 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ercc3P49135 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.63■□□□□ 0.57
Ercc3P49135 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc3P49135 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Ercc3P49135 Gm28659-201ENSMUST00000188013 759 ntBASIC18.62■□□□□ 0.57
Ercc3P49135 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.62■□□□□ 0.57
Ercc3P49135 Gm6376-201ENSMUST00000209407 580 ntBASIC18.62■□□□□ 0.57
Ercc3P49135 Gm9172-201ENSMUST00000212092 954 ntBASIC18.62■□□□□ 0.57
Ercc3P49135 Gm18622-201ENSMUST00000219361 595 ntBASIC18.62■□□□□ 0.57
Ercc3P49135 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ercc3P49135 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ercc3P49135 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ercc3P49135 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc3P49135 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.61■□□□□ 0.57
Ercc3P49135 Dancr-204ENSMUST00000132389 2347 ntBASIC18.61■□□□□ 0.57
Ercc3P49135 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Ercc3P49135 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.61■□□□□ 0.57
Ercc3P49135 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.61■□□□□ 0.57
Ercc3P49135 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.61■□□□□ 0.57
Ercc3P49135 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.61■□□□□ 0.57
Ercc3P49135 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc3P49135 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ercc3P49135 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.6■□□□□ 0.57
Ercc3P49135 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ercc3P49135 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.6■□□□□ 0.57
Ercc3P49135 Gm12497-201ENSMUST00000138778 237 ntBASIC18.6■□□□□ 0.57
Ercc3P49135 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.6■□□□□ 0.57
Ercc3P49135 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc3P49135 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ercc3P49135 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.59■□□□□ 0.57
Ercc3P49135 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Ercc3P49135 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.59■□□□□ 0.57
Ercc3P49135 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.59■□□□□ 0.57
Ercc3P49135 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc3P49135 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Ercc3P49135 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms