Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Brca1P48754 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Brca1P48754 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Brca1P48754 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Brca1P48754 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.48■□□□□ 0.39
Brca1P48754 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Brca1P48754 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.47■□□□□ 0.39
Brca1P48754 Gm13453-201ENSMUST00000118708 357 ntBASIC17.47■□□□□ 0.39
Brca1P48754 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.47■□□□□ 0.39
Brca1P48754 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Brca1P48754 Gm27680-201ENSMUST00000184192 160 ntBASIC17.47■□□□□ 0.39
Brca1P48754 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.47■□□□□ 0.39
Brca1P48754 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.47■□□□□ 0.39
Brca1P48754 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Brca1P48754 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.47■□□□□ 0.39
Brca1P48754 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Brca1P48754 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.47■□□□□ 0.39
Brca1P48754 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Brca1P48754 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Brca1P48754 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brca1P48754 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brca1P48754 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brca1P48754 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.46■□□□□ 0.39
Brca1P48754 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.46■□□□□ 0.39
Brca1P48754 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.46■□□□□ 0.39
Brca1P48754 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.46■□□□□ 0.39
Brca1P48754 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brca1P48754 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brca1P48754 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Brca1P48754 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Brca1P48754 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Brca1P48754 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Brca1P48754 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Brca1P48754 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Brca1P48754 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.45■□□□□ 0.38
Brca1P48754 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.45■□□□□ 0.38
Brca1P48754 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.45■□□□□ 0.38
Brca1P48754 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Brca1P48754 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.45■□□□□ 0.38
Brca1P48754 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.45■□□□□ 0.38
Brca1P48754 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.45■□□□□ 0.38
Brca1P48754 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brca1P48754 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.45■□□□□ 0.38
Brca1P48754 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.44■□□□□ 0.38
Brca1P48754 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.44■□□□□ 0.38
Brca1P48754 Gm44855-201ENSMUST00000205725 362 ntBASIC17.44■□□□□ 0.38
Brca1P48754 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Brca1P48754 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Brca1P48754 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Brca1P48754 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brca1P48754 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms