Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx3P48381 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx3P48381 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx3P48381 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfx3P48381 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx3P48381 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx3P48381 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx3P48381 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rfx3P48381 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx3P48381 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfx3P48381 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfx3P48381 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.21□□□□□ -0.13
Rfx3P48381 Gm6623-201ENSMUST00000173570 544 ntBASIC14.21□□□□□ -0.13
Rfx3P48381 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfx3P48381 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfx3P48381 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx3P48381 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx3P48381 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx3P48381 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx3P48381 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rfx3P48381 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Rfx3P48381 Gm44430-201ENSMUST00000203376 995 ntBASIC14.2□□□□□ -0.14
Rfx3P48381 Gm5587-201ENSMUST00000206270 674 ntBASIC14.2□□□□□ -0.14
Rfx3P48381 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rfx3P48381 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx3P48381 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfx3P48381 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rfx3P48381 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Rfx3P48381 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rfx3P48381 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Rfx3P48381 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rfx3P48381 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfx3P48381 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.19□□□□□ -0.14
Rfx3P48381 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfx3P48381 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx3P48381 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rfx3P48381 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfx3P48381 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rfx3P48381 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rfx3P48381 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms