Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Gm8097-201ENSMUST00000117903 829 ntBASIC14.4□□□□□ -0.1
Nkx2-2P42586 Gm8344-201ENSMUST00000119813 856 ntBASIC14.4□□□□□ -0.1
Nkx2-2P42586 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.4□□□□□ -0.1
Nkx2-2P42586 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-2P42586 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nkx2-2P42586 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Gm34391-201ENSMUST00000203706 907 ntBASIC14.39□□□□□ -0.11
Nkx2-2P42586 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Birc2-201ENSMUST00000054878 378 ntBASIC14.39□□□□□ -0.11
Nkx2-2P42586 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Gm10819-201ENSMUST00000099988 561 ntBASIC14.39□□□□□ -0.11
Nkx2-2P42586 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Nkx2-2P42586 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.38□□□□□ -0.11
Nkx2-2P42586 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nkx2-2P42586 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-2P42586 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms