Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.14■□□□□ 0.17
Cxcl12P40224 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.14■□□□□ 0.17
Cxcl12P40224 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Gm15693-201ENSMUST00000120470 637 ntBASIC16.13■□□□□ 0.17
Cxcl12P40224 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.13■□□□□ 0.17
Cxcl12P40224 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.13■□□□□ 0.17
Cxcl12P40224 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.13■□□□□ 0.17
Cxcl12P40224 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.13■□□□□ 0.17
Cxcl12P40224 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cxcl12P40224 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cxcl12P40224 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.12■□□□□ 0.17
Cxcl12P40224 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.12■□□□□ 0.17
Cxcl12P40224 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Gm6415-201ENSMUST00000118488 348 ntBASIC16.12■□□□□ 0.17
Cxcl12P40224 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Mir7684-201ENSMUST00000183858 60 ntBASIC16.12■□□□□ 0.17
Cxcl12P40224 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.12■□□□□ 0.17
Cxcl12P40224 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.12■□□□□ 0.17
Cxcl12P40224 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.12■□□□□ 0.17
Cxcl12P40224 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.12■□□□□ 0.17
Cxcl12P40224 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cxcl12P40224 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cxcl12P40224 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cxcl12P40224 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cxcl12P40224 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cxcl12P40224 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cxcl12P40224 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms