Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Upk2P38575 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.79□□□□□ -0.2
Upk2P38575 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Upk2P38575 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.78□□□□□ -0.2
Upk2P38575 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.78□□□□□ -0.2
Upk2P38575 Gm27867-201ENSMUST00000184778 125 ntBASIC13.78□□□□□ -0.2
Upk2P38575 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.78□□□□□ -0.2
Upk2P38575 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Upk2P38575 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.78□□□□□ -0.2
Upk2P38575 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk2P38575 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Upk2P38575 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk2P38575 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk2P38575 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Upk2P38575 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk2P38575 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk2P38575 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Upk2P38575 Gm12895-201ENSMUST00000122214 226 ntBASIC13.77□□□□□ -0.21
Upk2P38575 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.77□□□□□ -0.21
Upk2P38575 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Upk2P38575 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Upk2P38575 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Upk2P38575 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Upk2P38575 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.77□□□□□ -0.21
Upk2P38575 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk2P38575 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Upk2P38575 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Upk2P38575 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.76□□□□□ -0.21
Upk2P38575 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.76□□□□□ -0.21
Upk2P38575 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Upk2P38575 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Upk2P38575 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Gm17807-201ENSMUST00000186869 298 ntBASIC13.76□□□□□ -0.21
Upk2P38575 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.76□□□□□ -0.21
Upk2P38575 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Upk2P38575 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk2P38575 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.76□□□□□ -0.21
Upk2P38575 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upk2P38575 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms