Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sftpa1P35242 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sftpa1P35242 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sftpa1P35242 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sftpa1P35242 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.47□□□□□ -0.09
Sftpa1P35242 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Sftpa1P35242 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sftpa1P35242 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.46□□□□□ -0.09
Sftpa1P35242 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sftpa1P35242 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.46□□□□□ -0.09
Sftpa1P35242 Gm18889-201ENSMUST00000174284 929 ntBASIC14.46□□□□□ -0.09
Sftpa1P35242 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.46□□□□□ -0.09
Sftpa1P35242 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.46□□□□□ -0.09
Sftpa1P35242 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sftpa1P35242 Gm43125-201ENSMUST00000201724 730 ntBASIC14.46□□□□□ -0.09
Sftpa1P35242 Gm19164-201ENSMUST00000210667 640 ntBASIC14.46□□□□□ -0.09
Sftpa1P35242 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.46□□□□□ -0.09
Sftpa1P35242 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sftpa1P35242 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Sftpa1P35242 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sftpa1P35242 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sftpa1P35242 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.45□□□□□ -0.1
Sftpa1P35242 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Sftpa1P35242 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.45□□□□□ -0.1
Sftpa1P35242 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Thap2-203ENSMUST00000218989 527 ntBASIC14.45□□□□□ -0.1
Sftpa1P35242 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.45□□□□□ -0.1
Sftpa1P35242 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.45□□□□□ -0.1
Sftpa1P35242 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sftpa1P35242 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.45□□□□□ -0.1
Sftpa1P35242 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.45□□□□□ -0.1
Sftpa1P35242 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sftpa1P35242 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sftpa1P35242 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sftpa1P35242 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.44□□□□□ -0.1
Sftpa1P35242 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Rprl2-201ENSMUST00000157150 290 ntBASIC14.44□□□□□ -0.1
Sftpa1P35242 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.44□□□□□ -0.1
Sftpa1P35242 Gm22175-201ENSMUST00000175007 78 ntBASIC14.44□□□□□ -0.1
Sftpa1P35242 Gm5745-201ENSMUST00000183748 313 ntBASIC14.44□□□□□ -0.1
Sftpa1P35242 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms