Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Rom1P32958 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rom1P32958 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.45□□□□□ -0.42
Rom1P32958 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rom1P32958 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rom1P32958 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.45□□□□□ -0.42
Rom1P32958 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.45□□□□□ -0.42
Rom1P32958 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.45□□□□□ -0.42
Rom1P32958 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.45□□□□□ -0.42
Rom1P32958 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.45□□□□□ -0.42
Rom1P32958 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.45□□□□□ -0.42
Rom1P32958 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.45□□□□□ -0.42
Rom1P32958 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Rom1P32958 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rom1P32958 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rom1P32958 Gm5643-201ENSMUST00000117081 966 ntBASIC12.44□□□□□ -0.42
Rom1P32958 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.44□□□□□ -0.42
Rom1P32958 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.44□□□□□ -0.42
Rom1P32958 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Gm37179-201ENSMUST00000194862 823 ntBASIC12.44□□□□□ -0.42
Rom1P32958 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.44□□□□□ -0.42
Rom1P32958 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.44□□□□□ -0.42
Rom1P32958 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rom1P32958 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Rom1P32958 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rom1P32958 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rom1P32958 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rom1P32958 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Rom1P32958 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.43□□□□□ -0.42
Rom1P32958 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms