Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Vcam1P29533 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Vcam1P29533 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Vcam1P29533 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Vcam1P29533 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.99■□□□□ 0.47
Vcam1P29533 Gm27301-201ENSMUST00000184012 127 ntBASIC17.99■□□□□ 0.47
Vcam1P29533 Gm27494-201ENSMUST00000184735 189 ntBASIC17.99■□□□□ 0.47
Vcam1P29533 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vcam1P29533 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.99■□□□□ 0.47
Vcam1P29533 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Vcam1P29533 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vcam1P29533 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Vcam1P29533 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Vcam1P29533 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.98■□□□□ 0.47
Vcam1P29533 Gm20553-201ENSMUST00000204205 844 ntBASIC17.98■□□□□ 0.47
Vcam1P29533 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.98■□□□□ 0.47
Vcam1P29533 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vcam1P29533 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcam1P29533 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.97■□□□□ 0.47
Vcam1P29533 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Vcam1P29533 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.97■□□□□ 0.47
Vcam1P29533 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.97■□□□□ 0.47
Vcam1P29533 Gm10499-201ENSMUST00000174094 934 ntBASIC17.97■□□□□ 0.47
Vcam1P29533 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Vcam1P29533 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vcam1P29533 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.97■□□□□ 0.47
Vcam1P29533 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcam1P29533 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.96■□□□□ 0.47
Vcam1P29533 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vcam1P29533 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Vcam1P29533 Gm12008-201ENSMUST00000117791 755 ntBASIC17.96■□□□□ 0.47
Vcam1P29533 Mir1895-201ENSMUST00000122615 79 ntBASIC17.96■□□□□ 0.47
Vcam1P29533 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.96■□□□□ 0.47
Vcam1P29533 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.96■□□□□ 0.47
Vcam1P29533 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.96■□□□□ 0.47
Vcam1P29533 Gm8396-201ENSMUST00000057361 823 ntBASIC17.96■□□□□ 0.47
Vcam1P29533 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.96■□□□□ 0.47
Vcam1P29533 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vcam1P29533 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcam1P29533 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vcam1P29533 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vcam1P29533 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vcam1P29533 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vcam1P29533 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.95■□□□□ 0.46
Vcam1P29533 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcam1P29533 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcam1P29533 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms