Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col2a1P28481 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col2a1P28481 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.66■□□□□ 0.42
Col2a1P28481 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.66■□□□□ 0.42
Col2a1P28481 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.66■□□□□ 0.42
Col2a1P28481 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col2a1P28481 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Col2a1P28481 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col2a1P28481 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col2a1P28481 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.65■□□□□ 0.42
Col2a1P28481 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col2a1P28481 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col2a1P28481 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col2a1P28481 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Col2a1P28481 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col2a1P28481 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Col2a1P28481 Gm22065-201ENSMUST00000103753 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm22066-201ENSMUST00000103761 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24932-201ENSMUST00000103763 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24115-201ENSMUST00000103799 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm22190-201ENSMUST00000103827 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm22191-201ENSMUST00000103831 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24721-201ENSMUST00000103849 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm28018-201ENSMUST00000103869 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm26399-201ENSMUST00000103937 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25349-201ENSMUST00000177728 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm23616-201ENSMUST00000177797 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25871-201ENSMUST00000177816 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24752-201ENSMUST00000178240 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24496-201ENSMUST00000178287 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25649-201ENSMUST00000178476 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25548-201ENSMUST00000178681 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm23147-201ENSMUST00000178841 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm26095-201ENSMUST00000179270 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm22171-201ENSMUST00000179283 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm23936-201ENSMUST00000179354 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm22619-201ENSMUST00000179516 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25255-201ENSMUST00000179579 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24755-201ENSMUST00000179691 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm26506-201ENSMUST00000179692 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25086-201ENSMUST00000179931 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm23243-201ENSMUST00000180047 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24659-201ENSMUST00000180212 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm24169-201ENSMUST00000180244 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm23689-201ENSMUST00000180354 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm27359-201ENSMUST00000184153 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm27785-201ENSMUST00000184268 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm27466-201ENSMUST00000184396 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Gm27703-201ENSMUST00000184836 110 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.64■□□□□ 0.41
Col2a1P28481 Gm43474-201ENSMUST00000196415 774 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.64■□□□□ 0.41
Col2a1P28481 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.64■□□□□ 0.41
Col2a1P28481 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.64■□□□□ 0.41
Col2a1P28481 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col2a1P28481 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col2a1P28481 Gm25287-201ENSMUST00000103846 110 ntBASIC17.63■□□□□ 0.41
Col2a1P28481 Gm22918-201ENSMUST00000103855 110 ntBASIC17.63■□□□□ 0.41
Col2a1P28481 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.63■□□□□ 0.41
Col2a1P28481 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col2a1P28481 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col2a1P28481 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col2a1P28481 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.63■□□□□ 0.41
Col2a1P28481 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col2a1P28481 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col2a1P28481 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col2a1P28481 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col2a1P28481 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col2a1P28481 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms