Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col8a2P25318 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.11□□□□□ -0.31
Col8a2P25318 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col8a2P25318 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.11□□□□□ -0.31
Col8a2P25318 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.11□□□□□ -0.31
Col8a2P25318 Gm6443-201ENSMUST00000203599 874 ntBASIC13.11□□□□□ -0.31
Col8a2P25318 Gm5364-201ENSMUST00000216789 889 ntBASIC13.11□□□□□ -0.31
Col8a2P25318 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col8a2P25318 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col8a2P25318 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.11□□□□□ -0.31
Col8a2P25318 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Prob1-201ENSMUST00000097619 3021 ntBASIC13.1□□□□□ -0.31
Col8a2P25318 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col8a2P25318 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Col8a2P25318 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.1□□□□□ -0.31
Col8a2P25318 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Col8a2P25318 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.1□□□□□ -0.31
Col8a2P25318 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.1□□□□□ -0.31
Col8a2P25318 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col8a2P25318 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Gm13036-201ENSMUST00000117799 748 ntBASIC13.09□□□□□ -0.31
Col8a2P25318 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.09□□□□□ -0.31
Col8a2P25318 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col8a2P25318 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.09□□□□□ -0.31
Col8a2P25318 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.09□□□□□ -0.31
Col8a2P25318 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.09□□□□□ -0.31
Col8a2P25318 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col8a2P25318 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.09□□□□□ -0.31
Col8a2P25318 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.09□□□□□ -0.31
Col8a2P25318 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.09□□□□□ -0.31
Col8a2P25318 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col8a2P25318 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col8a2P25318 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms