Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Hoxc9P09633 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.27■□□□□ 0.84
Hoxc9P09633 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.27■□□□□ 0.84
Hoxc9P09633 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.27■□□□□ 0.84
Hoxc9P09633 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Hoxc9P09633 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.27■□□□□ 0.83
Hoxc9P09633 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hoxc9P09633 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Hoxc9P09633 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hoxc9P09633 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Gm43125-201ENSMUST00000201724 730 ntBASIC20.26■□□□□ 0.83
Hoxc9P09633 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.26■□□□□ 0.83
Hoxc9P09633 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hoxc9P09633 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc9P09633 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Gm25948-201ENSMUST00000175334 112 ntBASIC20.25■□□□□ 0.83
Hoxc9P09633 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.25■□□□□ 0.83
Hoxc9P09633 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hoxc9P09633 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc9P09633 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hoxc9P09633 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Hoxc9P09633 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.24■□□□□ 0.83
Hoxc9P09633 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.24■□□□□ 0.83
Hoxc9P09633 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Hoxc9P09633 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hoxc9P09633 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.24■□□□□ 0.83
Hoxc9P09633 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.24■□□□□ 0.83
Hoxc9P09633 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc9P09633 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxc9P09633 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.23■□□□□ 0.83
Hoxc9P09633 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Hoxc9P09633 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.23■□□□□ 0.83
Hoxc9P09633 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Gm2272-201ENSMUST00000194903 582 ntBASIC20.23■□□□□ 0.83
Hoxc9P09633 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.23■□□□□ 0.83
Hoxc9P09633 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.23■□□□□ 0.83
Hoxc9P09633 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.23■□□□□ 0.83
Hoxc9P09633 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.23■□□□□ 0.83
Hoxc9P09633 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc9P09633 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms