Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04212 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04212 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.78□□□□□ -0.36
P04212 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
P04212 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P04212 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.78□□□□□ -0.36
P04212 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04212 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.78□□□□□ -0.36
P04212 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.78□□□□□ -0.36
P04212 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P04212 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04212 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04212 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04212 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04212 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
P04212 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04212 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.77□□□□□ -0.36
P04212 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04212 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Mir770-201ENSMUST00000103252 94 ntBASIC12.77□□□□□ -0.37
P04212 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.77□□□□□ -0.37
P04212 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.77□□□□□ -0.37
P04212 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
P04212 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P04212 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.77□□□□□ -0.37
P04212 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
P04212 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P04212 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04212 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P04212 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
P04212 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.76□□□□□ -0.37
P04212 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.76□□□□□ -0.37
P04212 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
P04212 Gm9987-201ENSMUST00000069768 567 ntBASIC12.76□□□□□ -0.37
P04212 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
P04212 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.76□□□□□ -0.37
P04212 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04212 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.76□□□□□ -0.37
P04212 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
P04212 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.75□□□□□ -0.37
P04212 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.75□□□□□ -0.37
P04212 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Gm9013-201ENSMUST00000132939 882 ntBASIC12.75□□□□□ -0.37
P04212 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.75□□□□□ -0.37
P04212 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04212 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
P04212 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms