Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vti1aO89116 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vti1aO89116 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Vti1aO89116 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vti1aO89116 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.91■□□□□ 0.3
Vti1aO89116 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 Gm13036-201ENSMUST00000117799 748 ntBASIC16.91■□□□□ 0.3
Vti1aO89116 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.91■□□□□ 0.3
Vti1aO89116 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.91■□□□□ 0.3
Vti1aO89116 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.91■□□□□ 0.3
Vti1aO89116 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vti1aO89116 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vti1aO89116 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vti1aO89116 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Gm7222-201ENSMUST00000117512 906 ntBASIC16.9■□□□□ 0.3
Vti1aO89116 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Vti1aO89116 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.9■□□□□ 0.3
Vti1aO89116 Gm27628-201ENSMUST00000184911 107 ntBASIC16.9■□□□□ 0.3
Vti1aO89116 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vti1aO89116 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vti1aO89116 Dancr-204ENSMUST00000132389 2347 ntBASIC16.9■□□□□ 0.3
Vti1aO89116 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.89■□□□□ 0.3
Vti1aO89116 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vti1aO89116 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Gm14140-201ENSMUST00000119999 995 ntBASIC16.89■□□□□ 0.29
Vti1aO89116 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Vti1aO89116 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Gm25406-201ENSMUST00000157599 105 ntBASIC16.89■□□□□ 0.29
Vti1aO89116 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.89■□□□□ 0.29
Vti1aO89116 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Vti1aO89116 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vti1aO89116 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.88■□□□□ 0.29
Vti1aO89116 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.88■□□□□ 0.29
Vti1aO89116 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Vti1aO89116 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms