Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hcn3O88705 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Gm2274-201ENSMUST00000184539 609 ntBASIC15.07■□□□□ 0
Hcn3O88705 Gm18115-201ENSMUST00000221209 621 ntBASIC15.07■□□□□ 0
Hcn3O88705 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hcn3O88705 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.07■□□□□ 0
Hcn3O88705 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn3O88705 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hcn3O88705 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcn3O88705 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcn3O88705 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Hcn3O88705 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hcn3O88705 Gm7889-201ENSMUST00000185591 958 ntBASIC15.06■□□□□ 0
Hcn3O88705 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Hcn3O88705 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.06■□□□□ 0
Hcn3O88705 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.06■□□□□ 0
Hcn3O88705 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.06■□□□□ 0
Hcn3O88705 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcn3O88705 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.06■□□□□ 0
Hcn3O88705 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn3O88705 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hcn3O88705 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Hcn3O88705 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hcn3O88705 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Hcn3O88705 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Hcn3O88705 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.05■□□□□ -0
Hcn3O88705 Gm6433-201ENSMUST00000118634 875 ntBASIC15.05■□□□□ -0
Hcn3O88705 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Hcn3O88705 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.05■□□□□ -0
Hcn3O88705 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.05■□□□□ -0
Hcn3O88705 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.05■□□□□ -0
Hcn3O88705 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.05■□□□□ -0
Hcn3O88705 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.05■□□□□ -0
Hcn3O88705 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.05■□□□□ -0
Hcn3O88705 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.05■□□□□ -0
Hcn3O88705 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hcn3O88705 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hcn3O88705 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms