Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Gm15427-201ENSMUST00000117288 531 ntBASIC14.89□□□□□ -0.03
Tgfbr3O88393 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.89□□□□□ -0.03
Tgfbr3O88393 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Tgfbr3O88393 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.89□□□□□ -0.03
Tgfbr3O88393 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Gm13616-201ENSMUST00000120600 222 ntBASIC14.88□□□□□ -0.03
Tgfbr3O88393 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.88□□□□□ -0.03
Tgfbr3O88393 Gm27301-201ENSMUST00000184012 127 ntBASIC14.88□□□□□ -0.03
Tgfbr3O88393 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tgfbr3O88393 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Gm13365-201ENSMUST00000121188 973 ntBASIC14.87□□□□□ -0.03
Tgfbr3O88393 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Gm45612-201ENSMUST00000211320 160 ntBASIC14.87□□□□□ -0.03
Tgfbr3O88393 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tgfbr3O88393 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.86□□□□□ -0.03
Tgfbr3O88393 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tgfbr3O88393 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms