Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1bO88384 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vti1bO88384 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1bO88384 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vti1bO88384 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1bO88384 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Vti1bO88384 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1bO88384 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1bO88384 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vti1bO88384 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vti1bO88384 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.01□□□□□ -0.01
Vti1bO88384 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Vti1bO88384 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Vti1bO88384 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.01□□□□□ -0.01
Vti1bO88384 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Vti1bO88384 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Vti1bO88384 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1bO88384 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Gm38042-201ENSMUST00000191614 5208 ntBASIC15□□□□□ -0.01
Vti1bO88384 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Vti1bO88384 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15□□□□□ -0.01
Vti1bO88384 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Vti1bO88384 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vti1bO88384 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Vti1bO88384 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vti1bO88384 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15□□□□□ -0.01
Vti1bO88384 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.99□□□□□ -0.01
Vti1bO88384 Gm6623-201ENSMUST00000173570 544 ntBASIC14.99□□□□□ -0.01
Vti1bO88384 Gm6345-202ENSMUST00000180900 204 ntBASIC14.99□□□□□ -0.01
Vti1bO88384 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vti1bO88384 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vti1bO88384 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vti1bO88384 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms