Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.08□□□□□ -0.16
Col5a1O88207 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.08□□□□□ -0.16
Col5a1O88207 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.08□□□□□ -0.16
Col5a1O88207 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Gm14722-201ENSMUST00000118943 689 ntBASIC14.08□□□□□ -0.16
Col5a1O88207 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col5a1O88207 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.08□□□□□ -0.16
Col5a1O88207 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col5a1O88207 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col5a1O88207 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col5a1O88207 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.07□□□□□ -0.16
Col5a1O88207 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.07□□□□□ -0.16
Col5a1O88207 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col5a1O88207 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col5a1O88207 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Col5a1O88207 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.06□□□□□ -0.16
Col5a1O88207 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col5a1O88207 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col5a1O88207 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Col5a1O88207 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col5a1O88207 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Col5a1O88207 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.06□□□□□ -0.16
Col5a1O88207 Gm10253-201ENSMUST00000194270 940 ntBASIC14.06□□□□□ -0.16
Col5a1O88207 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col5a1O88207 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col5a1O88207 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Col5a1O88207 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.05□□□□□ -0.16
Col5a1O88207 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.05□□□□□ -0.16
Col5a1O88207 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.05□□□□□ -0.16
Col5a1O88207 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.05□□□□□ -0.16
Col5a1O88207 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col5a1O88207 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.05□□□□□ -0.16
Col5a1O88207 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.05□□□□□ -0.16
Col5a1O88207 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col5a1O88207 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.04□□□□□ -0.16
Col5a1O88207 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms