Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.38■□□□□ 0.21
Ttc3O88196 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ttc3O88196 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.38■□□□□ 0.21
Ttc3O88196 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.37■□□□□ 0.21
Ttc3O88196 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.37■□□□□ 0.21
Ttc3O88196 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ttc3O88196 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ttc3O88196 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.37■□□□□ 0.21
Ttc3O88196 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ttc3O88196 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ttc3O88196 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.36■□□□□ 0.21
Ttc3O88196 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.36■□□□□ 0.21
Ttc3O88196 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Gm26308-201ENSMUST00000157768 69 ntBASIC16.36■□□□□ 0.21
Ttc3O88196 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ttc3O88196 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ttc3O88196 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ttc3O88196 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ttc3O88196 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ttc3O88196 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.35■□□□□ 0.21
Ttc3O88196 Gm5312-201ENSMUST00000203728 547 ntBASIC16.35■□□□□ 0.21
Ttc3O88196 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ttc3O88196 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ttc3O88196 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ttc3O88196 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.35■□□□□ 0.21
Ttc3O88196 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ttc3O88196 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.35■□□□□ 0.21
Ttc3O88196 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.34■□□□□ 0.21
Ttc3O88196 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.34■□□□□ 0.21
Ttc3O88196 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.34■□□□□ 0.21
Ttc3O88196 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.34■□□□□ 0.21
Ttc3O88196 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.34■□□□□ 0.21
Ttc3O88196 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.34■□□□□ 0.21
Ttc3O88196 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ttc3O88196 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Ttc3O88196 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.34■□□□□ 0.21
Ttc3O88196 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.34■□□□□ 0.21
Ttc3O88196 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ttc3O88196 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ttc3O88196 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ttc3O88196 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ttc3O88196 Gm14701-201ENSMUST00000117156 348 ntBASIC16.33■□□□□ 0.21
Ttc3O88196 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Ttc3O88196 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.33■□□□□ 0.21
Ttc3O88196 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ttc3O88196 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Ttc3O88196 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.33■□□□□ 0.21
Ttc3O88196 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ttc3O88196 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms