Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.29■□□□□ 0.04
Tspan6O70401 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tspan6O70401 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tspan6O70401 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tspan6O70401 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tspan6O70401 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.28■□□□□ 0.04
Tspan6O70401 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Gm17271-201ENSMUST00000165535 355 ntBASIC15.28■□□□□ 0.04
Tspan6O70401 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Tspan6O70401 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.28■□□□□ 0.04
Tspan6O70401 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.28■□□□□ 0.04
Tspan6O70401 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tspan6O70401 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Tspan6O70401 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.27■□□□□ 0.04
Tspan6O70401 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tspan6O70401 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.27■□□□□ 0.04
Tspan6O70401 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Tspan6O70401 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tspan6O70401 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tspan6O70401 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.27■□□□□ 0.04
Tspan6O70401 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.27■□□□□ 0.04
Tspan6O70401 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.27■□□□□ 0.04
Tspan6O70401 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.27■□□□□ 0.04
Tspan6O70401 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tspan6O70401 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tspan6O70401 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tspan6O70401 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.26■□□□□ 0.03
Tspan6O70401 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.26■□□□□ 0.03
Tspan6O70401 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Tspan6O70401 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.26■□□□□ 0.03
Tspan6O70401 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.26■□□□□ 0.03
Tspan6O70401 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Tspan6O70401 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tspan6O70401 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tspan6O70401 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tspan6O70401 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tspan6O70401 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tspan6O70401 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms