Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Gm25990-201ENSMUST00000102440 86 ntBASIC15.49■□□□□ 0.07
Pdlim1O70400 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.49■□□□□ 0.07
Pdlim1O70400 Gm7862-201ENSMUST00000121461 292 ntBASIC15.49■□□□□ 0.07
Pdlim1O70400 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.49■□□□□ 0.07
Pdlim1O70400 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.49■□□□□ 0.07
Pdlim1O70400 Gm5864-201ENSMUST00000202263 970 ntBASIC15.49■□□□□ 0.07
Pdlim1O70400 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.49■□□□□ 0.07
Pdlim1O70400 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.49■□□□□ 0.07
Pdlim1O70400 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pdlim1O70400 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.49■□□□□ 0.07
Pdlim1O70400 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim1O70400 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pdlim1O70400 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Gm6089-201ENSMUST00000197666 938 ntBASIC15.48■□□□□ 0.07
Pdlim1O70400 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.48■□□□□ 0.07
Pdlim1O70400 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.48■□□□□ 0.07
Pdlim1O70400 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim1O70400 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Gm13884-201ENSMUST00000118103 829 ntBASIC15.47■□□□□ 0.07
Pdlim1O70400 Gm14722-201ENSMUST00000118943 689 ntBASIC15.47■□□□□ 0.07
Pdlim1O70400 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.47■□□□□ 0.07
Pdlim1O70400 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim1O70400 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.47■□□□□ 0.07
Pdlim1O70400 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim1O70400 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim1O70400 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim1O70400 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim1O70400 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms