Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pdlim3O70209 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdlim3O70209 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pdlim3O70209 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.26□□□□□ -0.13
Pdlim3O70209 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdlim3O70209 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.26□□□□□ -0.13
Pdlim3O70209 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Gm29257-201ENSMUST00000186115 639 ntBASIC14.26□□□□□ -0.13
Pdlim3O70209 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.26□□□□□ -0.13
Pdlim3O70209 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pdlim3O70209 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim3O70209 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdlim3O70209 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.25□□□□□ -0.13
Pdlim3O70209 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim3O70209 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdlim3O70209 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdlim3O70209 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.25□□□□□ -0.13
Pdlim3O70209 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Pdlim3O70209 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim3O70209 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim3O70209 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.24□□□□□ -0.13
Pdlim3O70209 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.24□□□□□ -0.13
Pdlim3O70209 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdlim3O70209 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.24□□□□□ -0.13
Pdlim3O70209 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pdlim3O70209 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.24□□□□□ -0.13
Pdlim3O70209 Gm13436-201ENSMUST00000120418 567 ntBASIC14.24□□□□□ -0.13
Pdlim3O70209 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdlim3O70209 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.24□□□□□ -0.13
Pdlim3O70209 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim3O70209 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim3O70209 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdlim3O70209 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.23□□□□□ -0.13
Pdlim3O70209 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim3O70209 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdlim3O70209 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms