Protein–RNA interactions for Protein: O55003

Bnip3, BCL2/adenovirus E1B 19 kDa protein-interacting protein 3, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bnip3O55003 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Bnip3O55003 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Bnip3O55003 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Bnip3O55003 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Bnip3O55003 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Bnip3O55003 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.18■□□□□ 0.5
Bnip3O55003 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.18■□□□□ 0.5
Bnip3O55003 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.18■□□□□ 0.5
Bnip3O55003 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.18■□□□□ 0.5
Bnip3O55003 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.18■□□□□ 0.5
Bnip3O55003 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Bnip3O55003 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.17■□□□□ 0.5
Bnip3O55003 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Bnip3O55003 Gm8318-201ENSMUST00000182954 872 ntBASIC18.17■□□□□ 0.5
Bnip3O55003 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.17■□□□□ 0.5
Bnip3O55003 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Bnip3O55003 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Bnip3O55003 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.17■□□□□ 0.5
Bnip3O55003 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.17■□□□□ 0.5
Bnip3O55003 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.17■□□□□ 0.5
Bnip3O55003 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Bnip3O55003 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.16■□□□□ 0.5
Bnip3O55003 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Bnip3O55003 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.16■□□□□ 0.5
Bnip3O55003 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.16■□□□□ 0.5
Bnip3O55003 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.16■□□□□ 0.5
Bnip3O55003 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.16■□□□□ 0.5
Bnip3O55003 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Bnip3O55003 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Bnip3O55003 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bnip3O55003 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.15■□□□□ 0.5
Bnip3O55003 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.15■□□□□ 0.5
Bnip3O55003 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Mir3113-201ENSMUST00000175478 76 ntBASIC18.15■□□□□ 0.5
Bnip3O55003 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.15■□□□□ 0.5
Bnip3O55003 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Gm7787-201ENSMUST00000216858 688 ntBASIC18.15■□□□□ 0.5
Bnip3O55003 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.15■□□□□ 0.5
Bnip3O55003 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
Bnip3O55003 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bnip3O55003 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Bnip3O55003 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Bnip3O55003 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bnip3O55003 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms