Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm5566-201ENSMUST00000116118 459 ntBASIC20.06■□□□□ 0.8
Cntnap1O54991 Gm42693-201ENSMUST00000196779 631 ntBASIC20.06■□□□□ 0.8
Cntnap1O54991 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.06■□□□□ 0.8
Cntnap1O54991 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.06■□□□□ 0.8
Cntnap1O54991 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.06■□□□□ 0.8
Cntnap1O54991 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntnap1O54991 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntnap1O54991 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.06■□□□□ 0.8
Cntnap1O54991 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC20.05■□□□□ 0.8
Cntnap1O54991 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC20.05■□□□□ 0.8
Cntnap1O54991 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.05■□□□□ 0.8
Cntnap1O54991 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cntnap1O54991 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cntnap1O54991 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.04■□□□□ 0.8
Cntnap1O54991 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.04■□□□□ 0.8
Cntnap1O54991 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.04■□□□□ 0.8
Cntnap1O54991 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.04■□□□□ 0.8
Cntnap1O54991 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cntnap1O54991 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cntnap1O54991 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Cntnap1O54991 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cntnap1O54991 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cntnap1O54991 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cntnap1O54991 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cntnap1O54991 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cntnap1O54991 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cntnap1O54991 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cntnap1O54991 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.03■□□□□ 0.8
Cntnap1O54991 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Gm5303-201ENSMUST00000117943 1252 ntBASIC20.02■□□□□ 0.8
Cntnap1O54991 Gm13233-201ENSMUST00000118760 1443 ntBASIC20.02■□□□□ 0.8
Cntnap1O54991 Gm13244-201ENSMUST00000118855 1446 ntBASIC20.02■□□□□ 0.8
Cntnap1O54991 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Gm10766-202ENSMUST00000194123 606 ntBASIC20.02■□□□□ 0.8
Cntnap1O54991 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cntnap1O54991 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cntnap1O54991 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cntnap1O54991 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cntnap1O54991 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cntnap1O54991 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cntnap1O54991 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cntnap1O54991 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cntnap1O54991 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC20.01■□□□□ 0.79
Cntnap1O54991 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC20.01■□□□□ 0.79
Cntnap1O54991 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC20.01■□□□□ 0.79
Cntnap1O54991 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.01■□□□□ 0.79
Cntnap1O54991 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC20.01■□□□□ 0.79
Cntnap1O54991 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms