Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Kcnu1O54982 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Kcnu1O54982 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Kcnu1O54982 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Kcnu1O54982 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Kcnu1O54982 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Kcnu1O54982 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.73■□□□□ 0.27
Kcnu1O54982 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Gm7284-201ENSMUST00000131667 944 ntBASIC16.73■□□□□ 0.27
Kcnu1O54982 Gm44454-201ENSMUST00000198541 138 ntBASIC16.73■□□□□ 0.27
Kcnu1O54982 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.73■□□□□ 0.27
Kcnu1O54982 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.73■□□□□ 0.27
Kcnu1O54982 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.73■□□□□ 0.27
Kcnu1O54982 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Kcnu1O54982 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Kcnu1O54982 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Rprl3-201ENSMUST00000157400 290 ntBASIC16.72■□□□□ 0.27
Kcnu1O54982 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.72■□□□□ 0.27
Kcnu1O54982 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Kcnu1O54982 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.72■□□□□ 0.27
Kcnu1O54982 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Kcnu1O54982 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.71■□□□□ 0.27
Kcnu1O54982 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Kcnu1O54982 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Kcnu1O54982 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Kcnu1O54982 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Kcnu1O54982 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.7■□□□□ 0.26
Kcnu1O54982 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.7■□□□□ 0.26
Kcnu1O54982 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Kcnu1O54982 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Kcnu1O54982 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.7■□□□□ 0.26
Kcnu1O54982 Gm33142-201ENSMUST00000193913 867 ntBASIC16.7■□□□□ 0.26
Kcnu1O54982 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms