Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.09□□□□□ -0.15
NlkO54949 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NlkO54949 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NlkO54949 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NlkO54949 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NlkO54949 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NlkO54949 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NlkO54949 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
NlkO54949 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.08□□□□□ -0.16
NlkO54949 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.08□□□□□ -0.16
NlkO54949 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NlkO54949 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.08□□□□□ -0.16
NlkO54949 Gm7889-201ENSMUST00000185591 958 ntBASIC14.08□□□□□ -0.16
NlkO54949 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.08□□□□□ -0.16
NlkO54949 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.08□□□□□ -0.16
NlkO54949 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NlkO54949 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NlkO54949 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NlkO54949 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.08□□□□□ -0.16
NlkO54949 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NlkO54949 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NlkO54949 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NlkO54949 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NlkO54949 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
NlkO54949 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.07□□□□□ -0.16
NlkO54949 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NlkO54949 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.07□□□□□ -0.16
NlkO54949 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.07□□□□□ -0.16
NlkO54949 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NlkO54949 Gm7370-201ENSMUST00000219471 767 ntBASIC14.07□□□□□ -0.16
NlkO54949 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.07□□□□□ -0.16
NlkO54949 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NlkO54949 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NlkO54949 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.07□□□□□ -0.16
NlkO54949 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms