Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarce1O54941 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smarce1O54941 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarce1O54941 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.68■□□□□ 0.58
Smarce1O54941 Gm6623-201ENSMUST00000173570 544 ntBASIC18.68■□□□□ 0.58
Smarce1O54941 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarce1O54941 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smarce1O54941 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarce1O54941 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarce1O54941 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smarce1O54941 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
Smarce1O54941 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarce1O54941 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.66■□□□□ 0.58
Smarce1O54941 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smarce1O54941 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarce1O54941 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.66■□□□□ 0.58
Smarce1O54941 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Sybu-209ENSMUST00000228639 4113 ntBASIC18.66■□□□□ 0.58
Smarce1O54941 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarce1O54941 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarce1O54941 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarce1O54941 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarce1O54941 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smarce1O54941 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.65■□□□□ 0.58
Smarce1O54941 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarce1O54941 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarce1O54941 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms