Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm23634-201ENSMUST00000175071 91 ntBASIC16.89■□□□□ 0.29
Nr1i3O35627 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nr1i3O35627 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.89■□□□□ 0.29
Nr1i3O35627 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nr1i3O35627 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.88■□□□□ 0.29
Nr1i3O35627 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nr1i3O35627 Gm6659-201ENSMUST00000174752 547 ntBASIC16.88■□□□□ 0.29
Nr1i3O35627 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nr1i3O35627 Gm9172-201ENSMUST00000212092 954 ntBASIC16.88■□□□□ 0.29
Nr1i3O35627 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.88■□□□□ 0.29
Nr1i3O35627 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.88■□□□□ 0.29
Nr1i3O35627 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nr1i3O35627 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1i3O35627 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.88■□□□□ 0.29
Nr1i3O35627 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1i3O35627 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nr1i3O35627 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 AA414768-201ENSMUST00000121924 1257 ntBASIC16.87■□□□□ 0.29
Nr1i3O35627 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Mir3081-201ENSMUST00000175305 84 ntBASIC16.87■□□□□ 0.29
Nr1i3O35627 Gm44454-201ENSMUST00000198541 138 ntBASIC16.87■□□□□ 0.29
Nr1i3O35627 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nr1i3O35627 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1i3O35627 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm8825-201ENSMUST00000182565 998 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm4518-201ENSMUST00000182638 718 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Nr1i3O35627 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.86■□□□□ 0.29
Nr1i3O35627 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.86■□□□□ 0.29
Nr1i3O35627 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Nr1i3O35627 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nr1i3O35627 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1i3O35627 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nr1i3O35627 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1i3O35627 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms