Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Npc1O35604 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
Npc1O35604 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
Npc1O35604 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Gm4459-201ENSMUST00000118750 468 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Gm7862-201ENSMUST00000121461 292 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.32■□□□□ 0.04
Npc1O35604 Gm4535-201ENSMUST00000182274 558 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.32■□□□□ 0.04
Npc1O35604 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.32■□□□□ 0.04
Npc1O35604 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Gm10355-201ENSMUST00000097146 517 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.32■□□□□ 0.04
Npc1O35604 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.32■□□□□ 0.04
Npc1O35604 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Npc1O35604 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.31■□□□□ 0.04
Npc1O35604 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Npc1O35604 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Npc1O35604 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Npc1O35604 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.31■□□□□ 0.04
Npc1O35604 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.31■□□□□ 0.04
Npc1O35604 Gm6296-201ENSMUST00000222599 943 ntBASIC15.31■□□□□ 0.04
Npc1O35604 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Npc1O35604 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Npc1O35604 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Npc1O35604 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Npc1O35604 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.31■□□□□ 0.04
Npc1O35604 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Npc1O35604 Gm11452-201ENSMUST00000122376 690 ntBASIC15.3■□□□□ 0.04
Npc1O35604 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Gm18733-201ENSMUST00000173950 856 ntBASIC15.3■□□□□ 0.04
Npc1O35604 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Gm7506-201ENSMUST00000207758 815 ntBASIC15.3■□□□□ 0.04
Npc1O35604 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Npc1O35604 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Npc1O35604 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Npc1O35604 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Npc1O35604 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms