Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.68■□□□□ 0.42
Stx1aO35526 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Stx1aO35526 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Gm13559-201ENSMUST00000120476 863 ntBASIC17.68■□□□□ 0.42
Stx1aO35526 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.68■□□□□ 0.42
Stx1aO35526 Gm37055-201ENSMUST00000191866 133 ntBASIC17.68■□□□□ 0.42
Stx1aO35526 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Stx1aO35526 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stx1aO35526 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.67■□□□□ 0.42
Stx1aO35526 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.67■□□□□ 0.42
Stx1aO35526 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Stx1aO35526 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Mir6404-201ENSMUST00000183699 94 ntBASIC17.67■□□□□ 0.42
Stx1aO35526 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.67■□□□□ 0.42
Stx1aO35526 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stx1aO35526 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Stx1aO35526 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Stx1aO35526 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Stx1aO35526 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.66■□□□□ 0.42
Stx1aO35526 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.66■□□□□ 0.42
Stx1aO35526 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.66■□□□□ 0.42
Stx1aO35526 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.66■□□□□ 0.42
Stx1aO35526 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.66■□□□□ 0.42
Stx1aO35526 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Stx1aO35526 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stx1aO35526 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.65■□□□□ 0.42
Stx1aO35526 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Stx1aO35526 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.65■□□□□ 0.42
Stx1aO35526 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Gm45058-201ENSMUST00000205810 766 ntBASIC17.65■□□□□ 0.42
Stx1aO35526 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Stx1aO35526 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Stx1aO35526 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stx1aO35526 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.64■□□□□ 0.41
Stx1aO35526 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.64■□□□□ 0.41
Stx1aO35526 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Stx1aO35526 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.64■□□□□ 0.41
Stx1aO35526 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms