Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.99□□□□□ -0.01
Clk3O35492 Gm7977-201ENSMUST00000193787 748 ntBASIC14.99□□□□□ -0.01
Clk3O35492 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.99□□□□□ -0.01
Clk3O35492 Gm45328-201ENSMUST00000210942 917 ntBASIC14.99□□□□□ -0.01
Clk3O35492 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.99□□□□□ -0.01
Clk3O35492 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clk3O35492 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.98□□□□□ -0.01
Clk3O35492 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clk3O35492 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Gm11950-201ENSMUST00000121615 838 ntBASIC14.98□□□□□ -0.01
Clk3O35492 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Clk3O35492 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clk3O35492 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.98□□□□□ -0.01
Clk3O35492 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clk3O35492 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk3O35492 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.97□□□□□ -0.01
Clk3O35492 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Clk3O35492 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Clk3O35492 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.97□□□□□ -0.01
Clk3O35492 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Clk3O35492 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
Clk3O35492 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Clk3O35492 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk3O35492 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.97□□□□□ -0.01
Clk3O35492 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clk3O35492 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Clk3O35492 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Gm10052-201ENSMUST00000168019 960 ntBASIC14.96□□□□□ -0.01
Clk3O35492 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.96□□□□□ -0.01
Clk3O35492 Gm29518-201ENSMUST00000190858 372 ntBASIC14.96□□□□□ -0.01
Clk3O35492 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Clk3O35492 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Gm7729-201ENSMUST00000050143 801 ntBASIC14.96□□□□□ -0.01
Clk3O35492 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk3O35492 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clk3O35492 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.96□□□□□ -0.02
Clk3O35492 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clk3O35492 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms