Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clcn6O35454 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clcn6O35454 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.97■□□□□ 0.31
Clcn6O35454 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC16.97■□□□□ 0.31
Clcn6O35454 Gm27001-201ENSMUST00000182252 936 ntBASIC16.97■□□□□ 0.31
Clcn6O35454 Gm37857-201ENSMUST00000191784 1199 ntBASIC16.97■□□□□ 0.31
Clcn6O35454 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC16.97■□□□□ 0.31
Clcn6O35454 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Clcn6O35454 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Clcn6O35454 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.97■□□□□ 0.31
Clcn6O35454 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.97■□□□□ 0.31
Clcn6O35454 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn6O35454 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.96■□□□□ 0.31
Clcn6O35454 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Mir466f-3-201ENSMUST00000104788 94 ntBASIC16.96■□□□□ 0.31
Clcn6O35454 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Clcn6O35454 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Gm29664-201ENSMUST00000191125 463 ntBASIC16.96■□□□□ 0.31
Clcn6O35454 AC161426.1-201ENSMUST00000214137 286 ntBASIC16.96■□□□□ 0.31
Clcn6O35454 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.96■□□□□ 0.31
Clcn6O35454 AC116724.1-201ENSMUST00000227900 972 ntBASIC16.96■□□□□ 0.31
Clcn6O35454 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Clcn6O35454 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn6O35454 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clcn6O35454 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clcn6O35454 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.96■□□□□ 0.3
Clcn6O35454 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Clcn6O35454 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Clcn6O35454 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clcn6O35454 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clcn6O35454 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Gm38325-201ENSMUST00000194507 1377 ntBASIC16.95■□□□□ 0.3
Clcn6O35454 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clcn6O35454 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC16.95■□□□□ 0.3
Clcn6O35454 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Clcn6O35454 Gm37678-201ENSMUST00000192908 1146 ntBASIC16.95■□□□□ 0.3
Clcn6O35454 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC16.95■□□□□ 0.3
Clcn6O35454 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.95■□□□□ 0.3
Clcn6O35454 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clcn6O35454 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.95■□□□□ 0.3
Clcn6O35454 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clcn6O35454 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.94■□□□□ 0.3
Clcn6O35454 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms