Protein–RNA interactions for Protein: O35452

Tnxb, Tenascin X, mousemouse

Predictions only

Length 4,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnxbO35452 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.25□□□□□ -0.61
TnxbO35452 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.25□□□□□ -0.61
TnxbO35452 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.25□□□□□ -0.61
TnxbO35452 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.25□□□□□ -0.61
TnxbO35452 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.25□□□□□ -0.61
TnxbO35452 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.25□□□□□ -0.61
TnxbO35452 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TnxbO35452 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TnxbO35452 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11.24□□□□□ -0.61
TnxbO35452 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Gm27341-201ENSMUST00000183570 106 ntBASIC11.24□□□□□ -0.61
TnxbO35452 Gm27501-201ENSMUST00000183599 107 ntBASIC11.24□□□□□ -0.61
TnxbO35452 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.24□□□□□ -0.61
TnxbO35452 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TnxbO35452 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC11.24□□□□□ -0.61
TnxbO35452 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TnxbO35452 Gm44344-201ENSMUST00000200287 129 ntBASIC11.24□□□□□ -0.61
TnxbO35452 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.24□□□□□ -0.61
TnxbO35452 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.24□□□□□ -0.61
TnxbO35452 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TnxbO35452 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TnxbO35452 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.24□□□□□ -0.61
TnxbO35452 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TnxbO35452 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.24□□□□□ -0.61
TnxbO35452 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.23□□□□□ -0.61
TnxbO35452 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.23□□□□□ -0.61
TnxbO35452 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.23□□□□□ -0.61
TnxbO35452 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Shd-206ENSMUST00000225145 998 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Gm7399-201ENSMUST00000032395 858 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TnxbO35452 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TnxbO35452 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.23□□□□□ -0.61
TnxbO35452 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.23□□□□□ -0.61
TnxbO35452 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.23□□□□□ -0.61
TnxbO35452 Gm37194-201ENSMUST00000193092 3031 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.23□□□□□ -0.61
TnxbO35452 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.23□□□□□ -0.61
TnxbO35452 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Gm12390-201ENSMUST00000117897 397 ntBASIC11.23□□□□□ -0.61
TnxbO35452 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TnxbO35452 Gm21854-201ENSMUST00000179901 471 ntBASIC11.23□□□□□ -0.61
TnxbO35452 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.23□□□□□ -0.61
TnxbO35452 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TnxbO35452 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.22□□□□□ -0.61
TnxbO35452 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TnxbO35452 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.22□□□□□ -0.61
TnxbO35452 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
TnxbO35452 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.22□□□□□ -0.61
TnxbO35452 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms