Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.55□□□□□ -0.08
Capn1O35350 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Capn1O35350 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.55□□□□□ -0.08
Capn1O35350 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Capn1O35350 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Capn1O35350 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.54□□□□□ -0.08
Capn1O35350 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Capn1O35350 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Capn1O35350 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.54□□□□□ -0.08
Capn1O35350 Gm18206-201ENSMUST00000207027 926 ntBASIC14.54□□□□□ -0.08
Capn1O35350 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.54□□□□□ -0.08
Capn1O35350 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Capn1O35350 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
Capn1O35350 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Capn1O35350 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Capn1O35350 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Capn1O35350 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.53□□□□□ -0.08
Capn1O35350 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Capn1O35350 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Capn1O35350 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.53□□□□□ -0.08
Capn1O35350 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.53□□□□□ -0.08
Capn1O35350 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.53□□□□□ -0.08
Capn1O35350 Mir5131-201ENSMUST00000175426 93 ntBASIC14.53□□□□□ -0.08
Capn1O35350 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.53□□□□□ -0.08
Capn1O35350 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.53□□□□□ -0.08
Capn1O35350 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.53□□□□□ -0.08
Capn1O35350 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Gm10060-201ENSMUST00000212002 111 ntBASIC14.53□□□□□ -0.08
Capn1O35350 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.53□□□□□ -0.08
Capn1O35350 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Capn1O35350 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.53□□□□□ -0.08
Capn1O35350 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Capn1O35350 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Capn1O35350 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Capn1O35350 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Capn1O35350 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Capn1O35350 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Capn1O35350 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Capn1O35350 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Capn1O35350 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Capn1O35350 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Capn1O35350 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Capn1O35350 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Capn1O35350 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Capn1O35350 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Capn1O35350 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms