Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.29□□□□□ -0.44
Tnfsf11O35235 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.29□□□□□ -0.44
Tnfsf11O35235 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf11O35235 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.28□□□□□ -0.44
Tnfsf11O35235 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfsf11O35235 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf11O35235 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf11O35235 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfsf11O35235 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf11O35235 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf11O35235 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms