Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.82□□□□□ -0.84
Pkd1O08852 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Pkd1O08852 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Pkd1O08852 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Pkd1O08852 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.82□□□□□ -0.84
Pkd1O08852 Mir3547-201ENSMUST00000175461 88 ntBASIC9.82□□□□□ -0.84
Pkd1O08852 Gm29667-201ENSMUST00000190817 490 ntBASIC9.82□□□□□ -0.84
Pkd1O08852 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.82□□□□□ -0.84
Pkd1O08852 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pkd1O08852 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.82□□□□□ -0.84
Pkd1O08852 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.82□□□□□ -0.84
Pkd1O08852 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.82□□□□□ -0.84
Pkd1O08852 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Pkd1O08852 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Pkd1O08852 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.81□□□□□ -0.84
Pkd1O08852 Mir1938-201ENSMUST00000158746 100 ntBASIC9.81□□□□□ -0.84
Pkd1O08852 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.81□□□□□ -0.84
Pkd1O08852 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.81□□□□□ -0.84
Pkd1O08852 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Gm44832-201ENSMUST00000208849 2303 ntBASIC9.81□□□□□ -0.84
Pkd1O08852 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.81□□□□□ -0.84
Pkd1O08852 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Pkd1O08852 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Pkd1O08852 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pkd1O08852 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm45774-201ENSMUST00000211992 2665 ntBASIC9.8□□□□□ -0.84
Pkd1O08852 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Pkd1O08852 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.8□□□□□ -0.84
Pkd1O08852 Gm17150-201ENSMUST00000165577 381 ntBASIC9.8□□□□□ -0.84
Pkd1O08852 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC9.8□□□□□ -0.84
Pkd1O08852 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.8□□□□□ -0.84
Pkd1O08852 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm21854-201ENSMUST00000179901 471 ntBASIC9.8□□□□□ -0.84
Pkd1O08852 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm9908-201ENSMUST00000211534 448 ntBASIC9.8□□□□□ -0.84
Pkd1O08852 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.8□□□□□ -0.84
Pkd1O08852 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Pkd1O08852 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Pkd1O08852 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pkd1O08852 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.79□□□□□ -0.84
Pkd1O08852 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Pkd1O08852 Gm43703-201ENSMUST00000200523 763 ntBASIC9.79□□□□□ -0.84
Pkd1O08852 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pkd1O08852 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Pkd1O08852 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pkd1O08852 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms