Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trove2O08848 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.15■□□□□ 0.18
Trove2O08848 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trove2O08848 Mir5130-201ENSMUST00000175160 84 ntBASIC16.15■□□□□ 0.18
Trove2O08848 Gm18959-201ENSMUST00000208954 655 ntBASIC16.15■□□□□ 0.18
Trove2O08848 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trove2O08848 Gm7213-201ENSMUST00000215977 950 ntBASIC16.15■□□□□ 0.18
Trove2O08848 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trove2O08848 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trove2O08848 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trove2O08848 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.14■□□□□ 0.17
Trove2O08848 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.14■□□□□ 0.17
Trove2O08848 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.14■□□□□ 0.17
Trove2O08848 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trove2O08848 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trove2O08848 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.13■□□□□ 0.17
Trove2O08848 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.13■□□□□ 0.17
Trove2O08848 Gm13186-201ENSMUST00000118031 316 ntBASIC16.13■□□□□ 0.17
Trove2O08848 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trove2O08848 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.13■□□□□ 0.17
Trove2O08848 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Trove2O08848 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.13■□□□□ 0.17
Trove2O08848 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trove2O08848 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trove2O08848 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trove2O08848 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.12■□□□□ 0.17
Trove2O08848 Gm45058-201ENSMUST00000205810 766 ntBASIC16.12■□□□□ 0.17
Trove2O08848 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trove2O08848 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.11■□□□□ 0.17
Trove2O08848 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trove2O08848 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Trove2O08848 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trove2O08848 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.11■□□□□ 0.17
Trove2O08848 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.11■□□□□ 0.17
Trove2O08848 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.11■□□□□ 0.17
Trove2O08848 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms