Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ercc2O08811 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Ercc2O08811 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Ercc2O08811 Gm17971-201ENSMUST00000190239 806 ntBASIC16.08■□□□□ 0.16
Ercc2O08811 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Gm8655-201ENSMUST00000221159 852 ntBASIC16.08■□□□□ 0.16
Ercc2O08811 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc2O08811 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ercc2O08811 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.07■□□□□ 0.16
Ercc2O08811 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.07■□□□□ 0.16
Ercc2O08811 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ercc2O08811 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.07■□□□□ 0.16
Ercc2O08811 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.07■□□□□ 0.16
Ercc2O08811 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.07■□□□□ 0.16
Ercc2O08811 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ercc2O08811 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc2O08811 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ercc2O08811 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Gm24589-201ENSMUST00000116692 94 ntBASIC16.06■□□□□ 0.16
Ercc2O08811 Gm8097-201ENSMUST00000117903 829 ntBASIC16.06■□□□□ 0.16
Ercc2O08811 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Gm27459-201ENSMUST00000184860 107 ntBASIC16.06■□□□□ 0.16
Ercc2O08811 Gm43347-201ENSMUST00000200226 580 ntBASIC16.06■□□□□ 0.16
Ercc2O08811 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc2O08811 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ercc2O08811 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.05■□□□□ 0.16
Ercc2O08811 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.05■□□□□ 0.16
Ercc2O08811 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.05■□□□□ 0.16
Ercc2O08811 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.05■□□□□ 0.16
Ercc2O08811 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.05■□□□□ 0.16
Ercc2O08811 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.05■□□□□ 0.16
Ercc2O08811 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.05■□□□□ 0.16
Ercc2O08811 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.05■□□□□ 0.16
Ercc2O08811 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.05■□□□□ 0.16
Ercc2O08811 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.05■□□□□ 0.16
Ercc2O08811 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ercc2O08811 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ercc2O08811 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.05■□□□□ 0.16
Ercc2O08811 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ercc2O08811 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms