Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.32■□□□□ 0.68
Dctn1O08788 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Dctn1O08788 Gm27494-201ENSMUST00000184735 189 ntBASIC19.32■□□□□ 0.68
Dctn1O08788 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.32■□□□□ 0.68
Dctn1O08788 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Dctn1O08788 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Dctn1O08788 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Dctn1O08788 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Dctn1O08788 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.31■□□□□ 0.68
Dctn1O08788 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Dctn1O08788 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Dctn1O08788 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.31■□□□□ 0.68
Dctn1O08788 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.31■□□□□ 0.68
Dctn1O08788 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Dctn1O08788 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Dctn1O08788 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Dctn1O08788 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dctn1O08788 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.3■□□□□ 0.68
Dctn1O08788 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Haglr-201ENSMUST00000100000 2085 ntBASIC19.3■□□□□ 0.68
Dctn1O08788 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.3■□□□□ 0.68
Dctn1O08788 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.3■□□□□ 0.68
Dctn1O08788 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.3■□□□□ 0.68
Dctn1O08788 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.3■□□□□ 0.68
Dctn1O08788 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.3■□□□□ 0.68
Dctn1O08788 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.3■□□□□ 0.68
Dctn1O08788 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Dctn1O08788 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Dctn1O08788 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Dctn1O08788 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dctn1O08788 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.29■□□□□ 0.68
Dctn1O08788 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Mir1895-201ENSMUST00000122615 79 ntBASIC19.29■□□□□ 0.68
Dctn1O08788 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Dctn1O08788 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dctn1O08788 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Dctn1O08788 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Dctn1O08788 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Dctn1O08788 Gm15427-201ENSMUST00000117288 531 ntBASIC19.28■□□□□ 0.68
Dctn1O08788 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.28■□□□□ 0.68
Dctn1O08788 Gm13365-201ENSMUST00000121188 973 ntBASIC19.28■□□□□ 0.68
Dctn1O08788 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.28■□□□□ 0.68
Dctn1O08788 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.28■□□□□ 0.68
Dctn1O08788 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.28■□□□□ 0.68
Dctn1O08788 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.28■□□□□ 0.68
Dctn1O08788 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dctn1O08788 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms