Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tcof1O08784 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tcof1O08784 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tcof1O08784 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tcof1O08784 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.35■□□□□ 0.53
Tcof1O08784 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
Tcof1O08784 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.35■□□□□ 0.53
Tcof1O08784 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Tcof1O08784 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Tcof1O08784 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.35■□□□□ 0.53
Tcof1O08784 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcof1O08784 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tcof1O08784 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.34■□□□□ 0.53
Tcof1O08784 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tcof1O08784 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.34■□□□□ 0.53
Tcof1O08784 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.34■□□□□ 0.53
Tcof1O08784 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.34■□□□□ 0.53
Tcof1O08784 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.34■□□□□ 0.53
Tcof1O08784 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tcof1O08784 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tcof1O08784 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tcof1O08784 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcof1O08784 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.33■□□□□ 0.53
Tcof1O08784 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Tcof1O08784 Gm8344-201ENSMUST00000119813 856 ntBASIC18.33■□□□□ 0.53
Tcof1O08784 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.33■□□□□ 0.53
Tcof1O08784 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.33■□□□□ 0.53
Tcof1O08784 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.33■□□□□ 0.53
Tcof1O08784 AV026068-213ENSMUST00000223675 1171 ntBASIC18.33■□□□□ 0.53
Tcof1O08784 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Tcof1O08784 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcof1O08784 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.33■□□□□ 0.52
Tcof1O08784 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tcof1O08784 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Grk6-207ENSMUST00000225925 2769 ntBASIC18.33■□□□□ 0.52
Tcof1O08784 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tcof1O08784 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Tcof1O08784 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tcof1O08784 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.32■□□□□ 0.52
Tcof1O08784 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.32■□□□□ 0.52
Tcof1O08784 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.32■□□□□ 0.52
Tcof1O08784 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcof1O08784 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.32■□□□□ 0.52
Tcof1O08784 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tcof1O08784 Gm15590-201ENSMUST00000078419 552 ntBASIC18.32■□□□□ 0.52
Tcof1O08784 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.32■□□□□ 0.52
Tcof1O08784 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tcof1O08784 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms