Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12□□□□□ -0.49
Gm10553J3QPF1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12□□□□□ -0.49
Gm10553J3QPF1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12□□□□□ -0.49
Gm10553J3QPF1 AC164629.2-201ENSMUST00000217916 270 ntBASIC12□□□□□ -0.49
Gm10553J3QPF1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12□□□□□ -0.49
Gm10553J3QPF1 Gm18856-201ENSMUST00000178096 1374 ntBASIC12□□□□□ -0.49
Gm10553J3QPF1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Gm10553J3QPF1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm10553J3QPF1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gm6257-201ENSMUST00000163864 910 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gm18622-201ENSMUST00000219361 595 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Mzt1-203ENSMUST00000227948 952 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Rps4l-201ENSMUST00000071745 943 ntBASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10553J3QPF1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm10553J3QPF1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms