Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-3J3QMG8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Gm4459-201ENSMUST00000118750 468 ntBASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav13d-3J3QMG8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gm12644-201ENSMUST00000119935 606 ntBASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gm12497-201ENSMUST00000138778 237 ntBASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Gm28033-201ENSMUST00000184224 96 ntBASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms