Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm8515-201ENSMUST00000194852 576 ntBASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm6888-201ENSMUST00000221983 706 ntBASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Nkx1-1G3UXB3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkx1-1G3UXB3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkx1-1G3UXB3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm12859-201ENSMUST00000117834 427 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm6415-201ENSMUST00000118488 348 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 AY702102-202ENSMUST00000194651 1173 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm43452-201ENSMUST00000201873 991 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.01■□□□□ 0.47
Nkx1-1G3UXB3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Syt7-204ENSMUST00000223586 1344 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm4609-201ENSMUST00000106443 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm5138-201ENSMUST00000113842 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm15191-201ENSMUST00000117933 1000 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm12182-201ENSMUST00000118655 1008 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm13882-201ENSMUST00000120886 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm10284-201ENSMUST00000145057 1005 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Rpph1-201ENSMUST00000175096 319 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm10481-201ENSMUST00000179228 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm2574-201ENSMUST00000181051 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm3200-201ENSMUST00000181493 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm4518-201ENSMUST00000182638 718 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm8330-201ENSMUST00000182754 1008 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm4575-201ENSMUST00000182991 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm8709-201ENSMUST00000183230 1012 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 AL593843.1-201ENSMUST00000195891 145 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm10293-201ENSMUST00000076317 1002 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm6316-201ENSMUST00000082064 1020 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm38325-201ENSMUST00000194507 1377 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm43981-201ENSMUST00000203285 1467 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Gm7901-201ENSMUST00000120430 1597 ntBASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms